The following information will guide you on how to properly setup a sync or backup with your Quicken data:
1) Start by opening GoodSync.
2) Click Browse on the left side, and select the Quicken location which holds Quicken data files.
Default Quicken data files location:
*XP: C:\Documents and Settings\<UserName>\My Documents\Quicken\
*Vista: C:\Users\<UserName>\Documents\Quicken\
3) Click Browse on the right side, and choose where you want to sync or back up to.
*Note: by default you are performing a sync, if you want to back up instead, first select Job > Options > 1- Way Left to Right, and then continue with step 3)
4) Start the sync/backup process by clicking the Analyze button.
5) Click the Sync button to complete your sync/backup.